miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|90596778|gb|EB030219.1|EB030219 GGCAGAAACATTCAGGCAAATTTGCAGACATGCTCAGGTTTCTGGTGTTGACGAGTCTCGCAGCCCTGGTGCTGGCCGAT
CTCCAGCCCCAGCCCAGGTATCTGGAGGACGGCTTGGAAAGAGTGGTGGGAGGTGAGGTGGCCAGACCCAACTCCTGGCC
CTGGCAGATCTCTCTTCAGTACAAATCTGGAAGCGGATACCACCACACATGTGGAGGAACCCTGATTGAGAGAGGCTGGG
TTATGACTGCTGCTCACTGTGTGGACAGCCAGAGGACGTGGCGTGTTGTTATCGGTGAACATGACCTTTACAGCGACAGT
GGCAGAGAGCAGATCATGGATGTCGTCCAAGTTTACATCCATCCCGGATGGGACAGCAGCAGCGTCGAGTAACGGGTGGT
GACATTGCTCTCCTGCGTATCTCCGCATGACGCCACCCTGAACTCCTACGTCCAGCTGGGCTCGCTGCCTCCCATGGGCC
AGATCCTGCCTCACAACAACCTCTGCTACGTCACCGGATGGGGACTCACCTCCACTGGTGGTAGCATATCTGCGCAGCTG
AAACAGGCCTATCTTCCTCTGGTCGACCACAGAGACCTGCTCCAGCAGCAGCTGGTGGGGCAGCACTCTCAAGACCACCA
TGGTGTGCGGTGGTGGAGCTGGTGAGTCTGGATGCAATGGTGACTCT




Most similar to sp|Q7SIG3|ELA1_SALSA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q7SIG3|ELA1_SALSA Elastase-1 OS=Salmo salar PE=1 SV=1
          Length = 236

 Score =  216 bits (550), Expect = 1e-55
 Identities = 103/156 (66%), Positives = 122/156 (78%)
 Frame = +3

Query: 123 VVGGEVARPNSWPWQISLQYKSGSGYHHTCGGTLIERGWVMTAAHCVDSQRTWRVVIGEH 302
           VVGG VA+PNSWPWQISLQYKSGS Y+HTCGG+LI +GWVMTAAHCVDS RTWRVV+GEH
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSARTWRVVLGEH 60

Query: 303 DLYSDSGREQIMDVVQVYIHPGWDSSSVE*RVVTLLSCVSPHDATLNSYVQLGSLPPMGQ 482
           +L ++ G+EQIM V  V+IH GW+S  V       L  ++   A+LNS VQL +LPP  Q
Sbjct: 61  NLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNT-QASLNSAVQLAALPPSNQ 119

Query: 483 ILPHNNLCYVTGWGLTSTGGSISAQLKQAYLPLVDH 590
           ILP+NN CY+TGWG TSTGG +S  LKQA+LP VDH
Sbjct: 120 ILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDH 155